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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Atf4, activating transcription factor 4
Sequence ID:NM_009716
Entrez Gene ID:11911
Ensembl ID:ENSMUSG00000042406

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15 E1|15 43.3 cM

Chromosomal Position (from UCSC)

Chromosomal Position:15: 80256668 - 80257541

NM_009716 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15028008561380086114
5038178008663680086950
81817258008706380087970

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30551592Full LengthBC085169activating transcription factor 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033846  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009716 NP_033846 Q06507
Q61328
bZIP_1

Related Sequences

 
mRNAGenPeptSwissProt
L13791 AAA40476 Q06507
M94087 AAA53043 Q06507
BC085169 AAH85169 Q06507
AB012277 BAA25314 Q794G7
AK003001 BAC25014 Q8CF69
AK138657 BAE23736 Q06507
AK144777 BAE26060 Q06507
AK146193 BAE26967 Q06507
AK155254 BAE33149 Q3U2J1
AK156298 BAE33662 Q06507
AK157839 BAE34220 Q3TZI8
X61507 CAA43723 Q61328

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atf4 NP_033846 R.norvegicus Atf4 79255   NP_077379 95
H.sapiens ATF4 468 Gene Info NP_001666 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta