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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Hspa1a, Heat shock protein 1A
Sequence ID:NM_010479
Entrez Gene ID:193740
Ensembl ID:ENSMUSG00000091971

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17 B1|17 18.95

Chromosomal Position (from UCSC)

Chromosomal Position:17: 34969360 - 34972156

NM_010479 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
127983510630335109100

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6815894Full LengthBC054782heat shock protein 1A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034609  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010479 NP_034609 Q61696 HSP70

Related Sequences

 
mRNAGenPeptSwissProt
M12571 AAA57234 Q61696
M12572 AAA57235 Q61696
BC054782 AAH54782 Q61696
BC157921 AAI57922 Q3TU85
AK160912 BAE36086 Q3TU85
Q61696
AK171820 BAE42680 Q3TAI8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Hspa1a NP_034609 M.musculus Hspa1b 15511 Gene Info NP_034608 100
R.norvegicus Hspa1b 294254   NP_997669 98
R.norvegicus Hspa1a 24472   NP_114177 98
H.sapiens HSPA1A 3303 Gene Info NP_005336 95
H.sapiens HSPA1B 3304 Gene Info NP_005337 95
D.melanogaster Hsp70Ba 44921   NP_731716 77
D.melanogaster Hsp70Bb 48582   NP_524927 77
D.melanogaster Hsp70Bc 48583   NP_650209 77
D.melanogaster Hsp70Aa 48581   NP_731651 77
D.melanogaster Hsp70Ab 44920   NP_524798 77
D.melanogaster Hsp70Bbb 50022   NP_788663 77
D.melanogaster Hsp68 42852   NP_524474 74
A.thaliana Hsp70b 838174   NP_173055 74
P.falciparum PF08_0054 2655254   XP_001349336 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)