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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3
Sequence ID:NM_145129
Entrez Gene ID:110834
Ensembl ID:ENSMUSG00000032303

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 B|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 55015484 - 55026430

NM_145129 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
115875485914954860735
158825995486294354863954
260027095486998554870094
271027545487195254871996
275528945487209454872233
289531235487413754874365

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40129520Full LengthBC120597cholinergic receptor, nicotinic, alpha polypeptide 3
40129522Full LengthBC120599cholinergic receptor, nicotinic, alpha polypeptide 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_660111  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145129 NP_660111   Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
BC120597 AAI20598 Q0VBK4
BC120599 AAI20600 Q0VBK4
AF325346 AAL37362 Q8VI11
AF459029 AAL58471 Q8VHH6
AF472588 AAL84757 Q8R4G9
AY574262 AAS90358 Q8R4G9
AK051730 BAC34740 Q8R4G9
AK053497 BAC35404 Q8R4G9
AK080415 BAC37909 Q8R4G9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Chrna3 NP_660111 R.norvegicus Chrna3 25101   NP_434692 99
H.sapiens CHRNA3 1136 Gene Info NP_000734 93
D.melanogaster nAcRalpha-80B 40521   NP_001097669 48
A.gambiae AgaP_AGAP000138 1272129   XP_311007 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)