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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Prom1, prominin 1
Sequence ID:NM_001163577
NM_001163578
NM_001163581
NM_001163582
NM_001163583
NM_001163584
NM_001163585
NM_008935
Entrez Gene ID:19126
Ensembl ID:ENSMUSG00000029086

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 B3|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 43993621 - 44101681

 Exon Info From UCSC:
NM_001163577
NM_001163578
NM_001163581
NM_001163582
NM_001163583
NM_001163584
NM_001163585
NM_008935

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4502359Full LengthBC028286prominin 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163577 NP_001157049    
NM_001163578 NP_001157050    
NM_001163581 NP_001157053    
NM_001163582 NP_001157054    
NM_001163583 NP_001157055    
NM_001163584 NP_001157056    
NM_001163585 NP_001157057    
NM_008935 NP_032961    

Related Sequences

 
mRNAGenPeptSwissProt
AF026269 AAB86715 O54990
AF039663 AAB96916 O54990
BC028286 AAH28286 Q8R056
AY099088 AAM28245 O54990
AF305215 AAO11840 O54990
AY223521 AAO72429 O54990
AY223522 AAO72430 O54990
AK029921 BAC26678 Q8CDK8
AK030027 BAC26745 O54990
AK085654 BAC39496 Q8C3K1
AK141347 BAE24657 Q3URN1
XM_001477174 XP_001477224  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Prom1 NP_001157049 R.norvegicus Prom1 60357   NP_068519 84
H.sapiens PROM1 8842 Gene Info NP_001139319 61
A.gambiae AgaP_AGAP005710 1276378   XP_315718 25
C.elegans F08B12.1 181330   NP_509907 24
D.melanogaster prominin-like 38372   NP_647770 21

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)