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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Kera, keratocan
Sequence ID:NM_008438
Entrez Gene ID:16545
Ensembl ID:ENSMUSG00000019932

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C3|10 61.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 97607208 - 97613688

NM_008438 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11739706983897070010
17410709707140697072302
107119509707544297076321

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40046884Full LengthBC114980keratocan

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032464  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008438 NP_032464 O35367 LRR_1
LRRNT

Related Sequences

 
mRNAGenPeptSwissProt
AF022256 AAC15505 O35367
BC114980 AAI14981 A4FUJ3
AK086197 BAC39627 Q8C3D9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kera NP_032464 R.norvegicus Kera 314771   NP_001101557 96
H.sapiens KERA 11081 Gene Info NP_008966 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta