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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Galr1, galanin receptor 1
Sequence ID:NM_008082
Entrez Gene ID:14427
Ensembl ID:ENSMUSG00000024553

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 E3-E4|18 55.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 82392808 - 82406777

NM_008082 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
115158256188782563401
151615818257119182571256
158228718257487982576168

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100016389Full LengthBC153078galanin receptor 1
100069549Full LengthBC172741galanin receptor 1
100015406BC148482galanin receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032108  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008082 NP_032108 P56479 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC148482 AAI48483  
BC153078 AAI53079  
BC172741 AAI72741  
Y15004 CAA75237 P56479

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Galr1 NP_032108 R.norvegicus Galr1 50577   NP_037090 96
H.sapiens GALR1 2587 Gene Info NP_001471 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)