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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Kcnmb1, potassium large conductance calcium-activated channel, subfamily M, beta member 1
Sequence ID:NM_031169
Entrez Gene ID:16533
Ensembl ID:ENSMUSG00000020155

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A4|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 33963012 - 33970750

NM_031169 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13143386301233863325
3154723386467633864833
4736443386618933866360
64541883387009433873637

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3988005Full LengthBC013338potassium large conductance calcium-activated channel, subfamily M, beta member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_112446  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_031169 NP_112446 Q5SQK1 CaKB

Related Sequences

 
mRNAGenPeptSwissProt
AF020711 AAD11857 Q8CAE3
BC013338 AAH13338 Q8CAE3
AK038987 BAC30193 Q8CAE3
Q5SQK1
AJ001291 CAA04651 Q8CAE3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Kcnmb1 NP_112446 R.norvegicus Kcnmb1 29747   NP_062146 94
H.sapiens KCNMB1 3779 Gene Info NP_004128 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)