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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc38a5, solute carrier family 38, member 5
Sequence ID:NM_172479
Entrez Gene ID:209837
Ensembl ID:ENSMUSG00000031170

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X A1.1|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 8271393 - 8280172

 Exon Info From UCSC:
NM_172479

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40057282Full LengthBC152401solute carrier family 38, member 5
6435136IncompleteBC058856solute carrier family 38, member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766067  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172479 NP_766067 Q3U1J0 Aa_trans

Related Sequences

 
mRNAGenPeptSwissProt
BC058856 AAH58856 Q6PD94
BC152401 AAI52402 Q3U1J0
AK054485 BAC35799 Q3U1J0
AK077667 BAC36941 Q3U1J0
AK155928 BAE33507 Q3U1J0
AK158125 BAE34371 Q3U1J0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc38a5 NP_766067 R.norvegicus Slc38a5 192208   NP_620209 97
H.sapiens SLC38A5 92745 Gene Info NP_277053 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)