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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Synm, synemin, intermediate filament protein
Sequence ID:NM_183312
NM_201639
NM_207663
Entrez Gene ID:233335
Ensembl ID:ENSMUSG00000030554

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7 C|7

Chromosomal Position (from UCSC)

Chromosomal Position:7: 67730167 - 67759693

 Exon Info From UCSC:
NM_183312
NM_201639
NM_207663

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100068133Full LengthBC167233synemin, intermediate filament protein
4988770IncompleteBC042785synemin, intermediate filament protein
6394713IncompleteBC047212desmuslin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_899135  NP_964001  NP_997546  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_183312 NP_899135   Filament
NM_201639 NP_964001 Q70IV5 Filament
NM_207663 NP_997546   Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC026872 AAH26872 Q05CE2
BC042785 AAH42785 Q80XS8
BC167233 AAI67233 Q70IV5
AK051446 BAC34642 Q8BQ62
AK053514 BAC35413 Q8BPR2
AK172937 BAD32215 Q70IV5
AK137146 BAE23251 Q8BQ62
AK143019 BAE25250 Q70IV5
AK161935 BAE36643 Q3TSN2
AJ579700 CAE30277 Q70IV5
AJ579701 CAE30278 Q70IV5
AJ579702 CAE30279 Q70IV5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Synm NP_964001 R.norvegicus Synm 308709   NP_001128330 88
H.sapiens SYNM 23336 Gene Info NP_663780 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)