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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Vpreb1, pre-B lymphocyte gene 1
Sequence ID:NM_016982
Entrez Gene ID:22362
Ensembl ID:ENSMUSG00000059305

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 A3|16 9.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:16: 16868402 - 16869248

NM_016982 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
75821686849516869070
5837721686915816869347

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8733924Full LengthBC119175pre-B lymphocyte gene 1
9053398Full LengthBC144850pre-B lymphocyte gene 1
40126370Full LengthBC117051pre-B lymphocyte gene 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_058678  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016982 NP_058678 P13372
Q545E0
V-set

Related Sequences

 
mRNAGenPeptSwissProt
BC117051 AAI17052 P13372
Q545E0
BC119175 AAI19176 Q0VEN0
BC144850 AAI44851 Q0VEN0
AK010843 BAB27218 P13372
Q545E0
AK010879 BAB27242 P13372
Q545E0
X05556 CAA29071 P13372
Q545E0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Vpreb1 NP_058678 M.musculus Vpreb2 22363 Gene Info NP_058679 97
R.norvegicus Vpreb1 303782   NP_001102315 84
R.norvegicus Vpreb2 363830   NP_001128260 84
H.sapiens VPREB1 7441 Gene Info NP_009059 75

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)