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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Ifna1, Interferon alpha 1
Sequence ID:NM_010502
Entrez Gene ID:15962
Ensembl ID:ENSMUSG00000095498

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:4 C4|4 42.6

Chromosomal Position (from UCSC)

Chromosomal Position:Unknown

NM_010502 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100014675Full LengthBC141650interferon alpha 1
100014230BC140285interferon alpha 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034632  

Protein Infomation

NM_010502 NP_034632 P01572 Interferon

Related Sequences

BC140285 AAI40286  
BC141650 AAI41651  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Ifna1 NP_034632 M.musculus Ifna12 242519 Gene Info NP_796335 90
M.musculus Ifna5 15968 Gene Info NP_034635 90
M.musculus Ifna7 15970 Gene Info NP_032360 89
M.musculus Ifna6 15969 Gene Info NP_996754 88
M.musculus Ifna14 404549 Gene Info NP_996858 88
M.musculus Ifna13 230396 Gene Info NP_796321 88
M.musculus Gm13280 230398 Gene Info NP_996750 88
M.musculus Ifna11 15964 Gene Info NP_032359 88
M.musculus Ifnab 15974 Gene Info NP_032362 87
M.musculus Gm12597 242517 Gene Info NP_996753 87
M.musculus Ifna2 15965 Gene Info NP_034633 86
M.musculus Ifna9 15972 Gene Info NP_034637 85
R.norvegicus Ifna5 690894   XP_001076062 77
R.norvegicus RGD1561246 502959   XP_578464 77
R.norvegicus LOC680208 680208   XP_001056120 77
H.sapiens IFNA1 3439 Gene Info NP_076918 63
H.sapiens IFNA13 3447 Gene Info NP_008831 62

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta