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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Adra1a, adrenergic receptor, alpha 1a
Sequence ID:NM_001271759
NM_001271760
NM_001271761
NM_013461
Entrez Gene ID:11549
Ensembl ID:ENSMUSG00000045875

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 D1|14

Chromosomal Position (from UCSC)

Chromosomal Position:14: 66637577 - 66727963

Transcript StartTranscript EndChromosomal Start Chromosomal End
13466725409467254439
34718166725582767257296
181723716734628267346836
237241376735040067352165

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40048262Full LengthBC113139adrenergic receptor, alpha 1a

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038489  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001271759 NP_001258688    
NM_001271760 NP_001258689    
NM_001271761 NP_001258690    
NM_013461 NP_038489 P97718 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
S80220 AAB47044 P97718
AF031431 AAC02658 P97718
BC113139 AAI13140 P97718
AK033490 BAC28316 Q8BZV1
AK042759 BAC31355 Q8BXZ4
AK079597 BAC37694 P97718
AK085653 BAC39495 Q8BUE5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Adra1a NP_038489 R.norvegicus Adra1a 29412   NP_058887 97
H.sapiens ADRA1A 148 Gene Info NP_000671 92
C.elegans dop-4 183715   NP_508238 41

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)