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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc6a2, solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2
Sequence ID:NM_009209
Entrez Gene ID:20538
Ensembl ID:ENSMUSG00000055368

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C5|8 45.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:8: 92961229 - 92997648

 Exon Info From UCSC:
NM_009209

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30431573Full LengthBC066216solute carrier family 6 (neurotransmitter transporter, noradrenalin), member 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033235  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009209 NP_033235 Q8R2I2
O55192
SNF

Related Sequences

 
mRNAGenPeptSwissProt
U76306 AAB94302 O55192
BC066216 AAH66216 Q6NZB4
L19564 AAK13572 Q99NG2
AY188506 AAO32937 Q8R2I2
AY525777 AAS17725 O55192
AY525778 AAS17726 O55192
AJ439987 CAD29195 Q8R2I2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc6a2 NP_033235 R.norvegicus Slc6a2 83511   NP_112633 98
H.sapiens SLC6A2 6530 Gene Info NP_001034 94
D.melanogaster DAT 36849   NP_523763 59
A.gambiae AgaP_AGAP007367 1269812   XP_308462 58
C.elegans dat-1 176304   NP_499043 52

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)