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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Dcn, decorin
Sequence ID:NM_001190451
NM_007833
Entrez Gene ID:13179
Ensembl ID:ENSMUSG00000019929

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cartilage, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C3|10 55.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 97479608 - 97517731

 Exon Info From UCSC:
NM_001190451
NM_007833

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861584Full LengthBC138564decorin
40130798Full LengthBC132521decorin
6409155IncompleteBC060126decorin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031859  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001190451 NP_001177380    
NM_007833 NP_031859 Q3UKR1
P28654
LRR_1
LRRNT

Related Sequences

 
mRNAGenPeptSwissProt
BC132521 AAI32522 Q3UKR1
P28654
BC138564 AAI38565 Q3UKR1
AK135287 BAE22476 Q3UKR1
P28654
AK145905 BAE26740 Q3UKR1
P28654
AK147020 BAE27613 Q3UKR1
P28654
AK161788 BAE36574 Q3TSV1
X53929 CAA37876 Q3UKR1
P28654
Y11757 CAA72421 Q6LAK9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Dcn NP_001177380 R.norvegicus Dcn 29139   NP_077043 88
H.sapiens DCN 1634 Gene Info NP_001911 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta