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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Setmar, SET domain and mariner transposase fusion gene
Sequence ID:NM_178391
Entrez Gene ID:74729
Ensembl ID:ENSMUSG00000034639

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 E1|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 108065045 - 108077120

NM_178391 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1194108015039108015232
1951609108025699108027113

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5067523Full LengthBC045208SET domain and mariner transposase fusion gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848478  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_178391 NP_848478 Q80UJ9 EC 2.1.1.43 SET
Pre-SET

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC045208 AAH45208 Q80UJ9 EC 2.1.1.43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Setmar NP_848478 R.norvegicus Setmar 500281   XP_001071895 91
D.melanogaster CG4565 41303   NP_001097743 44
C.elegans set-23 176969   NP_741320 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)