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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Nkap, NFKB activating protein
Sequence ID:NM_025937
Entrez Gene ID:67050
Ensembl ID:ENSMUSG00000016409

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:X A3.3|X

Chromosomal Position (from UCSC)

Chromosomal Position:X: 37126811 - 37148282

NM_025937 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
16133466675734667369
6146943467097234671052
6957653467650634676576
7669063467674634676886
9079703467967134679734
97110803468163234681741
108111563468183134681906
115713063468289934683048
130742623468778534690740

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4019392Full LengthBC026774NFKB activating protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_080213  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025937 NP_080213 Q9D0F4 DUF926

Related Sequences

 
mRNAGenPeptSwissProt
BC026774 AAH26774 Q9D0F4
AY388959 AAQ90403 Q9D0F4
AK011492 BAB27654 Q9D0F4
AK012826 BAB28497 Q9D0F4
AK038344 BAC29972 Q9D0F4
AK089943 BAC41010 Q9D0F4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nkap NP_080213 R.norvegicus Nkap 298342   NP_001020043 98
H.sapiens NKAP 79576 Gene Info NP_078804 91
D.melanogaster CG6066 43267   NP_651538 50
A.gambiae AgaP_AGAP001803 4577118   XP_001238454 49
P.falciparum PF07_0030 2655066   XP_001348999 45
A.thaliana AT4G02720 828193   NP_192181 44
C.elegans E01A2.4 171995   NP_491301 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)