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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mtrf1l, mitochondrial translational release factor 1-like
Sequence ID:NM_175374
Entrez Gene ID:108853
Ensembl ID:ENSMUSG00000019774

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 A1|10

Chromosomal Position (from UCSC)

Chromosomal Position:10: 5811886 - 5823846

NM_175374 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
141845225974523014
41949845264364526515
49968245275564527739
68384645289284529091
84796445308714530988
965110145323634532499
1102262145331344534653

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_780583  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_175374 NP_780583 Q8BJU9 RF-1
PCRF

Related Sequences

 
mRNAGenPeptSwissProt
AK078897 BAC37446 Q8BJU9
AK036424 BAE20502 Q8BJU9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mtrf1l NP_780583 R.norvegicus Mtrf1l 361473   NP_001020894 95
H.sapiens MTRF1L 54516 Gene Info NP_061914 83
A.gambiae AgaP_AGAP012078 1280596   XP_320450 53
A.gambiae AgaP_AGAP012082 1280591   XP_320444 51
D.melanogaster CG5705 34720   NP_609617 47
S.pombe SPAC2F7.17 2541478   NP_592987 41
S.cerevisiae MRF1 852734   NP_011372 41
A.thaliana APG3 825466   NP_191850 41
C.elegans W03F8.3 177294   NP_500737 39
N.crassa NCU06721 3877039   XP_960901 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)