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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Lss, lanosterol synthase
Sequence ID:NM_146006
Entrez Gene ID:16987
Ensembl ID:ENSMUSG00000033105

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C1|10 41.1 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 76553584 - 76556041

 Exon Info From UCSC:
NM_146006

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3498101Full LengthBC029082lanosterol synthase
4207278IncompleteBC019479lanosterol synthase

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_666118  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_146006 NP_666118 Q8BLN5 EC 5.4.99.7 Prenyltrans

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC019479 AAH19479 Q8VCN8  
BC029082 AAH29082 Q8BLN5 EC 5.4.99.7
AK044016 BAC31739 Q8BLN5 EC 5.4.99.7
AK078023 BAC37102 Q8BLN5 EC 5.4.99.7

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Lss NP_666118 R.norvegicus Lss 81681   NP_112311 92
H.sapiens LSS 4047 Gene Info NP_001001438 86
A.thaliana CAS1 815275   NP_178722 50
S.pombe erg7 2542882   NP_593702 43
N.crassa NCU01119 3877205   XP_961026 42
S.cerevisiae ERG7 856470   NP_011939 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)