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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Atp13a4, ATPase type 13A4
Sequence ID:NM_001164612
NM_001164613
NM_172613
Entrez Gene ID:224079
Ensembl ID:ENSMUSG00000038094

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16 B2|16

Chromosomal Position (from UCSC)

Chromosomal Position:16: 29540478 - 29544859

 Exon Info From UCSC:
NM_001164612
NM_001164613
NM_172613

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6486835Full LengthBC048410ATPase type 13A4
1548513IncompleteBC038696ATPase type 13A4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766201  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164612 NP_001158084    
NM_001164613 NP_001158085    
NM_172613 NP_766201   E1-E2_ATPase
Cation_ATPase_N

Related Sequences

 
mRNAGenPeptSwissProt
BC048410 AAH48410 Q5XF90
AK028776 BAC26113 Q5XF90
AK029303 BAC26383 Q5XF90
BK005557 DAA05588 Q5XF90

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Atp13a4 NP_001158084 R.norvegicus Atp13a4 288026   XP_221355 95
H.sapiens ATP13A4 84239 Gene Info NP_115655 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)