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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Ifngr1, interferon gamma receptor 1
Sequence ID:NM_010511
Entrez Gene ID:15979
Ensembl ID:ENSMUSG00000020009

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, lung, lymph node, lymphoreticular, mammary gland, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10 A3|10 15.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 19592006 - 19610167

NM_010511 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12401931176319312002
2413551931722119317335
3565191932112519321288
5206981932355919323737
6998851932603919326225
88610101932706219327186
101120991932894219330030

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8861637Full LengthBC138617interferon gamma receptor 1
40130876Full LengthBC132599interferon gamma receptor 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034641  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010511 NP_034641 P15261 IFNGR1

Related Sequences

 
mRNAGenPeptSwissProt
M28995 AAA37895 P15261
M26711 AAA37896 P15261
M28233 AAA37898 P15261
M25764 AAA39177 P15261
Q540M5
J05265 AAA39178 P15261
Q540M5
AF128216 AAF22557 P15261
AF128217 AAF22558 P15261
Q540M5
BC132599 AAI32600 Q540M5
BC138617 AAI38618 Q540M5
AY157836 AAO21311 P15261
Q540M5
AY157837 AAO21312 P15261
Q540M5
AK150503 BAE29616 Q3U8T2
AK151079 BAE30094 P15261
AK152085 BAE30935 Q3U8T2
AK152384 BAE31172 Q3U8T2
AK153084 BAE31709 Q3U8T2
AK153347 BAE31923 P15261
AK159359 BAE35017 P15261
AK159660 BAE35269 Q3TW49
AK159839 BAE35417 Q3TW49
AK169593 BAE41245 P15261

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ifngr1 NP_034641 R.norvegicus Ifngr1 116465   NP_446235 73
H.sapiens IFNGR1 3459 Gene Info NP_000407 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta