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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cox6c, cytochrome c oxidase subunit VIc
Sequence ID:NM_053071
Entrez Gene ID:12864
Ensembl ID:ENSMUSG00000014313

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, bone marrow, brain, cerebellum, cerebrum, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15|15 B3.3

Chromosomal Position (from UCSC)

Chromosomal Position:15: 35931982 - 35938162

NM_053071 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
251463586173035861851
1472753586503935865167
2764053586690935867038
4065273586787935868000

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
1397127Full LengthBC094413cytochrome c oxidase, subunit VIc
4195595Full LengthBC024666cytochrome c oxidase, subunit VIc

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_444301  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_053071 NP_444301 Q9CPQ1 COX6C

Related Sequences

 
mRNAGenPeptSwissProt
BC024666 AAH24666 Q9CPQ1
BC094413 AAH94413 Q9CPQ1
AK012602 BAB28348 Q9CPQ1
AK013459 BAB28866 Q9CPQ1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cox6c NP_444301 R.norvegicus Cox6c 54322   NP_062233 93
H.sapiens COX6C 1345 Gene Info NP_004365 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)