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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Il17a, interleukin 17A
Sequence ID:NM_010552
Entrez Gene ID:16171
Ensembl ID:ENSMUSG00000025929

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1|1 A

Chromosomal Position (from UCSC)

Chromosomal Position:1: 20730904 - 20734496

NM_010552 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1842072098520721068
852962072217620722387
29711712072370220724576

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8734052Full LengthBC119303interleukin 17A
8734058Full LengthBC119309interleukin 17A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034682  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_010552 NP_034682 Q544E6
Q62386
IL17

Related Sequences

 
mRNAGenPeptSwissProt
U43088 AAB05222 Q544E6
Q62386
BC119303 AAI19304 Q544E6
BC119309 AAI19310 Q544E6
AK040420 BAC30590 Q544E6
Q62386

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Il17a NP_034682 R.norvegicus Il17a 301289   NP_001100367 86
H.sapiens IL17A 3605 Gene Info NP_002181 63

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta