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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Nlrp3, NLR family, pyrin domain containing 3
Sequence ID:NM_145827
Entrez Gene ID:216799
Ensembl ID:ENSMUSG00000032691

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.3|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 59541584 - 59566951

NM_145827 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11825935618759356368
1835035935657059356890
5046175936027559360388
61823735936149159363246
237425445936527259365442
254527155936924959369419
271628865937188459372054
288730575937854159378711
305832285937934659379516
322940215937966559380457

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40048724Full LengthBC116174NLR family, pyrin domain containing 3
40048725Full LengthBC116175NLR family, pyrin domain containing 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_665826  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145827 NP_665826 Q8R4B8 LRR_1
PAAD_DAPIN
NACHT

Related Sequences

 
mRNAGenPeptSwissProt
BC116174 AAI16175 Q8R4B8
BC116175 AAI16176 Q8R4B8
AF486632 AAL90874 Q8R4B8
AY337285 AAR03540 Q8R4B8
AY355340 AAR14737 Q8R4B8
AY495376 AAS75794 Q8R4B8
AY495377 AAS75795 Q8R4B8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Nlrp3 NP_665826 R.norvegicus Nlrp3 287362   XP_220513 96
H.sapiens NLRP3 114548 Gene Info NP_004886 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)