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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Plxnb1, plexin B1
Sequence ID:NM_172775
Entrez Gene ID:235611
Ensembl ID:ENSMUSG00000053646

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9 F2|9

Chromosomal Position (from UCSC)

Chromosomal Position:9: 109095591 - 109119911

 Exon Info From UCSC:
NM_172775

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9087612Full LengthBC150701plexin B1
5357885IncompleteBC024799plexin B1
5366741IncompleteBC043322plexin B1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_766363  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_172775 NP_766363 Q8CJH3 Sema
PSI
TIG
Plexin_cytopl

Related Sequences

 
mRNAGenPeptSwissProt
BC043322 AAH43322 Q8CJH3
BC150701 AAI50702 B2RWT9
AB072381 BAC22660 Q8CJH3
AK129133 BAC97943 Q8CJH3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Plxnb1 NP_766363 H.sapiens PLXNB1 5364 Gene Info NP_002664 87

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)