Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Slc6a1, solute carrier family 6 (neurotransmitter transporter, GABA), member 1
Sequence ID:NM_178703
Entrez Gene ID:232333
Ensembl ID:ENSMUSG00000030310

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 E3|6

Chromosomal Position (from UCSC)

Chromosomal Position:6: 114301061 - 114301942

 Exon Info From UCSC:
NM_178703

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6827121Full LengthBC059080solute carrier family 6 (neurotransmitter transporter, GABA), member 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848818  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178703 NP_848818 P31648 SNF

Related Sequences

 
mRNAGenPeptSwissProt
BC059080 AAH59080 Q6PCX2
AK042956 BAC31418 P31648
AK052971 BAC35226 P31648
AK053798 BAC35530 Q8BPL9
AK053883 BAC35574 P31648

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Slc6a1 NP_848818 R.norvegicus Slc6a1 79212   NP_077347 100
H.sapiens SLC6A1 6529 Gene Info NP_003033 98
A.gambiae AgaP_AGAP009768 1279174   XP_318854 63
D.melanogaster CG1732 43805   NP_651930 59
C.elegans snf-11 191770   NP_505873 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)