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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ppia, Peptidylprolyl isomerase A
Sequence ID:NM_008907
Entrez Gene ID:268373
Ensembl ID:ENSMUSG00000071866

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:11 A1|11 1.0

Chromosomal Position (from UCSC)

Chromosomal Position:11: 6415867 - 6419817

NM_008907 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
111063158726315981
11114163181036318133
14223063182286318316
23140363191156319287
40473663194806319812

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2645114Full LengthBC094272peptidylprolyl isomerase A
5055863Full LengthBC094632peptidylprolyl isomerase A
6442005Full LengthBC083076peptidylprolyl isomerase A
6533710Full LengthBC087928peptidylprolyl isomerase A
30843162Full LengthBC099478peptidylprolyl isomerase A

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032933  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_008907 NP_032933 Q5SVY2
P17742
EC 5.2.1.8 Pro_isomerase

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC083076 AAH83076 Q5SVY2
P17742
EC 5.2.1.8
BC087928 AAH87928 Q5SVY2
P17742
EC 5.2.1.8
BC094272 AAH94272 Q5SVY2
P17742
EC 5.2.1.8
BC094632 AAH94632 Q5SVY2
P17742
EC 5.2.1.8
BC099478 AAH99478 Q5SVY2
P17742
EC 5.2.1.8
DQ985731 ABL77398 Q5SVY2  
AK002236 BAB21954 Q5SVY2
P17742
EC 5.2.1.8
AK007981 BAB25387 Q5SVY2
P17742
EC 5.2.1.8
AK010649 BAB27089 P17742 EC 5.2.1.8
AK012491 BAB28276 Q9CZK9  
AK012531 BAB28300 Q5SVY2
P17742
EC 5.2.1.8
AK012663 BAB28392 Q5SVY2
P17742
EC 5.2.1.8
AK028210 BAC25817 Q5SVY2
P17742
EC 5.2.1.8
AK131942 BAE20888 Q5SVY2
P17742
EC 5.2.1.8
AK136788 BAE23129 Q5SVY2
P17742
EC 5.2.1.8
AK151347 BAE30323 Q3UAJ1  
AK151583 BAE30523 Q5SVY2
P17742
EC 5.2.1.8
AK153030 BAE31662 Q5SVY2
P17742
EC 5.2.1.8
AK160631 BAE35927 Q5SVY2
P17742
EC 5.2.1.8
AK160780 BAE36004 Q5SVY2
P17742
EC 5.2.1.8
AK168035 BAE40018 Q5SVY2
P17742
EC 5.2.1.8
AK169813 BAE41385 Q3TE63  
X52803 CAA36989 Q5SVY2
P17742
EC 5.2.1.8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ppia NP_032933 R.norvegicus Ppia 25518   NP_058797 98
R.norvegicus LOC100360977 100360977   XP_002728136 98
R.norvegicus LOC100362969 100362969   XP_002729493 98
H.sapiens PPIA 5478 Gene Info NP_066953 96
D.melanogaster CG7768 39573   NP_729966 75
A.thaliana ROC5 829639   NP_195213 73
A.thaliana ROC3 816161   NP_179251 71
C.elegans cyn-7 180027   NP_506749 71
A.thaliana AT2G21130 816648   NP_179709 70
A.thaliana ROC1 830029   NP_195585 70
C.elegans cyn-3 180028   NP_506751 70
C.elegans cyn-2 176807   NP_499828 69
P.falciparum PfCyP19 814534   XP_001351290 64

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)