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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Sele, selectin, endothelial cell
Sequence ID:NM_011345
Entrez Gene ID:20339
Ensembl ID:ENSMUSG00000026582

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 H2.2|1 86.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 164048215 - 164058486

 Exon Info From UCSC:
NM_011345

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8733832Full LengthBC119083selectin, endothelial cell
40129718Full LengthBC120795selectin, endothelial cell

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035475  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011345 NP_035475 Q3U5F6 EGF
Lectin_C
Sushi

Related Sequences

 
mRNAGenPeptSwissProt
M87862 AAA37577 Q3U5F6
Q00690
BC119083 AAI19084 Q3U5F6
BC120795 AAI20796 Q3U5F6
AK153623 BAE32123 Q3U5F6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Sele NP_035475 R.norvegicus Sele 25544   NP_620234 82
H.sapiens SELE 6401 Gene Info NP_000441 73

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta