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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Oprd1, opioid receptor, delta 1
Sequence ID:NM_013622
Entrez Gene ID:18386
Ensembl ID:ENSMUSG00000050511

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4 D1-D3|4 64.8 cM

Chromosomal Position (from UCSC)

Chromosomal Position:4: 132110725 - 132144486

NM_013622 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13343131666640131669982
33443693131673033131673382
36944021131700073131700400

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860977Full LengthBC137958opioid receptor, delta 1
8860988Full LengthBC137969opioid receptor, delta 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_038650  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_013622 NP_038650 P32300
Q8BLP9
7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
S65335 AAA16009 P32300
L11064 AAA37520 P32300
L06322 AAA37522 P32300
S66181 AAB28546 P32300
BC137958 AAI37959 A2AD37
BC137969 AAI37970 A2AD37
S81965 AAO32629  
AK043873 BAC31688 Q8BLP9

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Oprd1 NP_038650 R.norvegicus Oprd1 24613   NP_036749 97
H.sapiens OPRD1 4985 Gene Info NP_000902 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)