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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Zcchc9, zinc finger, CCHC domain containing 9
Sequence ID:NM_145453
Entrez Gene ID:69085
Ensembl ID:ENSMUSG00000021621

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13 C3|13

Chromosomal Position (from UCSC)

Chromosomal Position:13: 91805954 - 91807642

NM_145453 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
137349193613791936858
7358039193842791938495
8048969194021591940307
89710479194047091940620
104814579194535591945764
145815449194721491947300

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4982244Full LengthBC024496zinc finger, CCHC domain containing 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_663428  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_145453 NP_663428   zf-CCHC

Related Sequences

 
mRNAGenPeptSwissProt
BC024496 AAH24496 Q8R1J3
AK007541 BAC25176 Q8CF14
AK044802 BAC32099 Q8BRH8

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Zcchc9 NP_663428 R.norvegicus Zcchc9 309986   NP_001013174 93
H.sapiens ZCCHC9 84240 Gene Info NP_001124507 83
S.pombe SPAC683.02c 2543491   NP_594481 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)