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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cplx1, complexin 1
Sequence ID:NM_007756
Entrez Gene ID:12889
Ensembl ID:ENSMUSG00000033615

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5

Chromosomal Position (from UCSC)

Chromosomal Position:5: 108518561 - 108549970

NM_007756 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
261798108947572108949344
17991974108954410108954585
19752078108977524108977627
20792217108978907108979045

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4527117Full LengthBC014803complexin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031782  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007756 NP_031782   Synaphin

Related Sequences

 
mRNAGenPeptSwissProt
BC014803 AAH14803 P63040
D38614 BAA07605 P63040
AK134820 BAE22299 P63040
AK158166 BAE34390 P63040
AK159026 BAE34774 P63040

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cplx1 NP_031782 R.norvegicus Cplx1 64832   NP_074055 100
H.sapiens CPLX1 10815 Gene Info NP_006642 97

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)