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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pde1c, phosphodiesterase 1C
Sequence ID:NM_001025568
NM_001159952
NM_001159953
NM_001159955
NM_001159956
NM_001159957
NM_001159960
NM_011054
Entrez Gene ID:18575
Ensembl ID:ENSMUSG00000004347

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6 B3|6 27.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:6: 56082023 - 56369604

 Exon Info From UCSC:
NM_001025568
NM_001159952
NM_001159953
NM_001159955
NM_001159956
NM_001159957
NM_001159960
NM_011054

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5400689Full LengthBC032277phosphodiesterase 1C

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001020739  NP_035184  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001025568 NP_001020739 Q5D0E7   PDEase_I
PDEase_I_N
NM_001159952 NP_001153424      
NM_001159953 NP_001153425 Q64338 EC 3.1.4.17  
NM_001159955 NP_001153427      
NM_001159956 NP_001153428      
NM_001159957 NP_001153429      
NM_001159960 NP_001153432      
NM_011054 NP_035184     PDEase_I
PDEase_I_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
L76944 AAC37701 Q64338
Q5D0E7
EC 3.1.4.17
L76947 AAC37702 Q64338 EC 3.1.4.17
L76946 AAC37703 Q64338 EC 3.1.4.17
BC032277 AAH32277 Q5D0E7  
AK014887 BAB29604 Q9D5W0  
AK029531 BAC26499 Q8CDV2  
AK030423 BAC26956 Q64338 EC 3.1.4.17
AK077123 BAC36626 Q9D5W0  
AK082180 BAC38431 Q5D0E7  
AK139923 BAE24184 Q3USZ6  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pde1c NP_001153425 R.norvegicus Pde1c 81742   NP_112340 99
H.sapiens PDE1C 5137 Gene Info NP_001177987 95
C.elegans pde-1 173200   NP_493343 50

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)