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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Wdr77, WD repeat domain 77
Sequence ID:NM_027432
Entrez Gene ID:70465
Ensembl ID:ENSMUSG00000000561

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, synovium, t-cell, testis, thymus, uncharacterized tissue, uterus, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F2.2|3

Chromosomal Position (from UCSC)

Chromosomal Position:3: 105961690 - 105969370

NM_027432 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1201105762415105762615
202387105762870105763055
388529105764534105764675
530579105764932105764981
580650105767359105767429
651705105767540105767594
706777105767998105768069
778886105768682105768790
887955105769274105769342
9563553105770080105772677

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2654151Full LengthBC005755WD repeat domain 77

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_081708  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_027432 NP_081708 Q99J09 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC005755 AAH05755 Q99J09
AK012014 BAB27975 Q99J09
AK032897 BAC28076 Q99J09
AK048488 BAC33350 Q99J09
AK050391 BAC34232 Q99J09
AK131608 BAE20717 Q3V2T0
AK163839 BAE37512 Q99J09
AK169128 BAE40907 Q99J09

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Wdr77 NP_081708 R.norvegicus Wdr77 310769   NP_001008771 95
H.sapiens WDR77 79084 Gene Info NP_077007 90
A.gambiae AgaP_AGAP009782 1279195   XP_318877 27
D.melanogaster vls 35289   NP_610019 24

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)