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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Ptgdr, prostaglandin D receptor
Sequence ID:NM_008962
Entrez Gene ID:19214
Ensembl ID:ENSMUSG00000071489

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:14 C1|14 13.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:14: 44851234 - 44859375

NM_008962 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
122224547090945473130
222331874547808545479049

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40130574Full LengthBC132297prostaglandin D receptor

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032988  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008962 NP_032988 P70263 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
BC132297 AAI32298 P70263
AK032488 BAC27895 P70263

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Ptgdr NP_032988 R.norvegicus Ptgdr 498475   NP_001128636 92
R.norvegicus Ptgdrl 63889   NP_071577 92
H.sapiens PTGDR 5729 Gene Info NP_000944 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)