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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Pctp, phosphatidylcholine transfer protein
Sequence ID:NM_008796
Entrez Gene ID:18559
Ensembl ID:ENSMUSG00000020553

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 C|11 52.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 89983426 - 89991083

NM_008796 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
113408984473089846069
134114088984740689847473
140915808984850989848680
158116608985000889850087
166117788985238489852501
177919718986401589864207

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100062268Full LengthBC156713phosphatidylcholine transfer protein
30445835IncompleteBC071234phosphatidylcholine transfer protein
100014218BC140284phosphatidylcholine transfer protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_032822  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_008796 NP_032822 P53808 START

Related Sequences

 
mRNAGenPeptSwissProt
AF151639 AAF02537 P53808
AF114437 AAF08346 P53808
BC140284 AAI40285  
BC156713 AAI56714  
Z50024 CAA90328 P53808

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pctp NP_032822 R.norvegicus Pctp 29510   NP_058921 93
H.sapiens PCTP 58488 Gene Info NP_067036 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)