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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Scg2, secretogranin II
Sequence ID:NM_009129
Entrez Gene ID:20254
Ensembl ID:ENSMUSG00000050711

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:1 C4|1 43.6 cM

Chromosomal Position (from UCSC)

Chromosomal Position:1: 79435456 - 79436650

NM_009129 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
123507943124379433592
235124857943653079436664

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6493827Full LengthBC048249secretogranin II

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033155  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009129 NP_033155 Q03517 Granin

Related Sequences

 
mRNAGenPeptSwissProt
BC048249 AAH48249 Q4W8U9
AK002953 BAB22476 Q03517

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Scg2 NP_033155 R.norvegicus Scg2 24765   NP_073160 95
H.sapiens SCG2 7857 Gene Info NP_003460 82

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)