Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Pax9, paired box gene 9
Sequence ID:NM_011041
Entrez Gene ID:18511
Ensembl ID:ENSMUSG00000001497

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 C1|12 26.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:12: 56695643 - 56710557

NM_011041 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
12265779662557796850
2278535779756057798186
8549965780099857801140
99725745781063957812216

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3707718Full LengthBC005794paired box gene 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035171  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_011041 NP_035171 P47242
Q3V1K1
PAX

Related Sequences

 
mRNAGenPeptSwissProt
BC005794 AAH05794 P47242
Q3V1K1
AK034985 BAC28903 Q8BS81
AK132404 BAE21149 P47242
Q3V1K1
X84000 CAA58824 P47242
Q3V1K1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Pax9 NP_035171 H.sapiens PAX9 5083 Gene Info NP_006185 99
R.norvegicus Pax9 362741   NP_001034628 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)