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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Rag2, recombination activating gene 2
Sequence ID:NM_009020
Entrez Gene ID:19374
Ensembl ID:ENSMUSG00000032864

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2 E2|2 56.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:2: 101624739 - 101632016

NM_009020 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1123101464904101465026
124186101468293101468355
1873393101469478101472684

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053404Full LengthBC144856recombination activating gene 2
40129471Full LengthBC120548recombination activating gene 2
40129988Full LengthBC125473recombination activating gene 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033046  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009020 NP_033046 Q542D1
P21784
RAG2

Related Sequences

 
mRNAGenPeptSwissProt
M64796 AAB82302 Q542D1
P21784
BC120548 AAI20549 Q542D1
BC125473 AAI25474 Q542D1
BC144856 AAI44857 B7ZMX3
AK031014 BAC27213 Q8CD87
AK040375 BAC30576 Q542D1
P21784
AK089075 BAC40737 Q542D1
P21784

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Rag2 NP_033046 R.norvegicus Rag2 295953   NP_001093998 96
H.sapiens RAG2 5897 Gene Info NP_000527 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)