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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Cxcl2, chemokine (C-X-C motif) ligand 2
Sequence ID:NM_009140
Entrez Gene ID:20310
Ensembl ID:ENSMUSG00000058427

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 E1|5 51.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 90903872 - 90905937

NM_009140 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11259133292491333048
1262499133314191333264
2503339133338291333465
33410839133421491334963

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40055368Full LengthBC119511chemokine (C-X-C motif) ligand 2
40055369Full LengthBC119512chemokine (C-X-C motif) ligand 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033166  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009140 NP_033166 Q3U1J5
P10889
IL8

Related Sequences

 
mRNAGenPeptSwissProt
BC119511 AAI19512 Q3U1J5
BC119512 AAI19513 Q3U1J5
P10889
AK137628 BAE23436 Q3U1J5
P10889
AK150450 BAE29571 Q3UCP1
AK155874 BAE33476 Q3U1L9
AK155916 BAE33502 Q3U1J5
P10889
AK157079 BAE33956 Q3U1J5
P10889
X53798 CAA37807 Q3U1J5
P10889

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cxcl2 NP_033166 R.norvegicus Cxcl2 114105   NP_446099 86
H.sapiens CXCL3 2921 Gene Info NP_002081 65

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)