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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Csf2, colony stimulating factor 2 (granulocyte-macrophage)
Sequence ID:NM_009969
Entrez Gene ID:12981
Ensembl ID:ENSMUSG00000018916

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 B1.3|11 29.5 cM

Chromosomal Position (from UCSC)

Chromosomal Position:11: 54247269 - 54249899

NM_009969 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
14265406077154061196
4275525406193954062064
5535945406282354062864
59510335406296254063400

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40126197Full LengthBC116878colony stimulating factor 2 (granulocyte-macrophage)
40126199Full LengthBC116880colony stimulating factor 2 (granulocyte-macrophage)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_034099  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009969 NP_034099 P01587 GM_CSF

Related Sequences

 
mRNAGenPeptSwissProt
M11848 AAA37483 P01587
BC116878 AAI16879 Q14AD9
BC116880 AAI16881 Q14AD9
EU366957 ABY66391 Q5SX78
AK053196 BAE20692 P01587
Q5SX78
X02333 CAA26193 P01587
X03019 CAA26820 P01587
X05906 CAA29336 P01587

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Csf2 NP_034099 R.norvegicus Csf2 116630   XP_340800 73
H.sapiens CSF2 1437 Gene Info NP_000749 56

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta