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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. St6galnac1, ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
Sequence ID:NM_011371
Entrez Gene ID:20445
Ensembl ID:ENSMUSG00000009588

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11 E2|11

Chromosomal Position (from UCSC)

Chromosomal Position:11: 116738233 - 116767892

NM_011371 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
5902116626338116627235
9031002116627386116627485
10031092116627572116627661
10931196116627851116627954
11971335116628291116628429
13361507116628994116629165
15081676116629258116629426
16772175116630184116630682
21762396116636600116636820

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9053931Full LengthBC145373ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
9053932Full LengthBC145374ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
9055707Full LengthBC141095ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_035501  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_011371 NP_035501 Q9QZ39 EC 2.4.99.3 Glyco_transf_29

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC141095 AAI41096 Q9QZ39 EC 2.4.99.3
BC145373 AAI45374 Q9QZ39 EC 2.4.99.3
BC145374 AAI45375 B7ZNQ3  
Y11274 CAA72137 Q9QZ39 EC 2.4.99.3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus St6galnac1 NP_035501 R.norvegicus St6galnac1 287920   NP_001099329 81
H.sapiens ST6GALNAC1 55808 Gene Info NP_060884 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)