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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Syt4, synaptotagmin IV
Sequence ID:NM_009308
Entrez Gene ID:20983
Ensembl ID:ENSMUSG00000024261

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:18 B1|18 10.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 31438198 - 31447406

NM_009308 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
126833159746131600143
268428043160124631601366
280536193160310431603918
362039013160678731607068

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5361684Full LengthBC058208synaptotagmin IV
6832499IncompleteBC052738synaptotagmin IV

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033334  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_009308 NP_033334 P40749 C2

Related Sequences

 
mRNAGenPeptSwissProt
BC058208 AAH58208 P40749
AK032106 BAC27705 P40749
AK043985 BAC31726 P40749
AK050515 BAC34301 P40749
AK083960 BAC39080 P40749
AK220264 BAD90189 Q571C5
AK148681 BAE28640 P40749

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Syt4 NP_033334 R.norvegicus Syt4 64440   NP_113881 98
H.sapiens SYT4 6860 Gene Info NP_065834 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)