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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Mm. Syt4, synaptotagmin IV
Sequence ID:NM_009308
Entrez Gene ID:20983
Ensembl ID:ENSMUSG00000024261

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

Cytogenetic Location (from UniGene)

Cytogenetic Location:18 B1|18 10.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:18: 31438198 - 31447406

NM_009308 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5361684Full LengthBC058208synaptotagmin IV
6832499IncompleteBC052738synaptotagmin IV

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_033334  

Protein Infomation

NM_009308 NP_033334 P40749 C2

Related Sequences

BC058208 AAH58208 P40749
AK032106 BAC27705 P40749
AK043985 BAC31726 P40749
AK050515 BAC34301 P40749
AK083960 BAC39080 P40749
AK220264 BAD90189 Q571C5
AK148681 BAE28640 P40749

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
M.musculus Syt4 NP_033334 R.norvegicus Syt4 64440   NP_113881 98
H.sapiens SYT4 6860 Gene Info NP_065834 90

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)