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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cyld, cylindromatosis (turban tumor syndrome)
Sequence ID:NM_001128169
NM_001128170
NM_001128171
NM_173369
Entrez Gene ID:74256
Ensembl ID:ENSMUSG00000036712

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cerebellum, cerebrum, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, limb, liver, lung, lymph node, lymphoreticular, mammary gland, nervous, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, synovium, testis, thymus, uncharacterized tissue, vascular
  • SAGE Expression Matrix

  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:8 C3|8

Chromosomal Position (from UCSC)

Chromosomal Position:8: 88747058 - 88748554

 Exon Info From UCSC:
NM_001128169
NM_001128170
NM_001128171
NM_173369

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3983771Full LengthBC042438cylindromatosis (turban tumor syndrome)
5325140IncompleteBC049879cylindromatosis (turban tumor syndrome)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_775545  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001128169 NP_001121641      
NM_001128170 NP_001121642      
NM_001128171 NP_001121643      
NM_173369 NP_775545 Q80TQ2 EC 3.4.19.12 CAP_GLY

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC042438 AAH42438 Q80TQ2 EC 3.4.19.12
BC049879 AAH49879 Q80TQ2 EC 3.4.19.12
AK039054 BAC30222 Q80TQ2 EC 3.4.19.12
AK042764 BAC31357 Q80TQ2 EC 3.4.19.12
AK122389 BAC65671 Q80TQ2 EC 3.4.19.12
AK133479 BAE21677 Q3V028  
AK134926 BAE22340 Q3UY73  
AK167424 BAE39512 Q3TJI3  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cyld NP_001121642 R.norvegicus Cyld 312937   NP_001017380 99
H.sapiens CYLD 1540 Gene Info NP_056062 95
A.gambiae AgaP_AGAP008412 1277567   XP_317037 50
D.melanogaster CYLD 34380   NP_723556 48

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)