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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Arid5b, AT rich interactive domain 5B (MRF1-like)
Sequence ID:NM_023598
Entrez Gene ID:71371
Ensembl ID:ENSMUSG00000019947

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10|10 B5.1

Chromosomal Position (from UCSC)

Chromosomal Position:10: 68097623 - 68278715

NM_023598 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
130776755834067561416
307832766756464267564840
327733746758099867581095
337534276758944667589498
342836326759153667591740
363337456759774167597853
374639766764877367649003
397742026770575167705976
420344576774067767740931
445844946774143767741473

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100066288Full LengthBC165988AT rich interactive domain 5B (MRF1-like)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_076087  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_023598 NP_076087 Q8BM75 ARID

Related Sequences

 
mRNAGenPeptSwissProt
AF169968 AAF89682 Q8BM75
BC165988 AAI65988 Q8BM75
AF280065 AAM93269 Q8BM75
AF401550 AAM93282 Q8BM75
AK017396 BAB30727 Q8BM75
AK031596 BAC27467 Q8BM75
AK034633 BAC28778 Q8BM75
AK162717 BAE37034 Q3TRJ5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Arid5b NP_076087 R.norvegicus Arid5b 309728   NP_001101094 96
H.sapiens ARID5B 84159 Gene Info NP_115575 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)