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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Tmx1, thioredoxin-related transmembrane protein 1
Sequence ID:NM_028339
Entrez Gene ID:72736
Ensembl ID:ENSMUSG00000021072

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12 C2|12

Chromosomal Position (from UCSC)

Chromosomal Position:12: 70453157 - 70464464

NM_028339 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11677155414071554306
1682837155699871557113
2843297155756771557612
3304587155976571559893
4595047156133171561376
5056067156146571561566
6076737156538671565452
67423207156696471568610

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4503129Full LengthBC017603thioredoxin domain containing 1
5354337Full LengthBC021533thioredoxin domain containing 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_082615  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_028339 NP_082615 Q8VBT0 Thioredoxin

Related Sequences

 
mRNAGenPeptSwissProt
BC017603 AAH17603 Q8VBT0
BC021533 AAH21533 Q8VBT0
AK013150 BAB28680 Q8VBT0
AK030429 BAC26960 Q8VBT0
AK050567 BAC34326 Q8VBT0
AK137059 BAE23223 Q8VBT0
AK150511 BAE29624 Q8VBT0
AK153027 BAE31660 Q8VBT0
AK170468 BAE41816 Q8VBT0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Tmx1 NP_082615 R.norvegicus Tmx1 362751   NP_001019971 92
H.sapiens TMX1 81542 Gene Info NP_110382 78
C.elegans dpy-11 179040   NP_504655 46
D.melanogaster CG5554 37775   NP_611838 44
A.gambiae AgaP_AGAP001613 1281559   XP_321485 42

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)