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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Gpn3, GPN-loop GTPase 3
Sequence ID:NM_024216
Entrez Gene ID:68080
Ensembl ID:ENSMUSG00000029464

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5 F|5 65.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:5: 122372567 - 122382788

NM_024216 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11159122822516122822664
160268122823919122824027
269436122828475122828642
437561122829989122830113
562677122831198122831313
678774122831406122831502
775903122832056122832184
9041412122832269122832777

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3257412Full LengthBC003341GPN-loop GTPase 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077178  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024216 NP_077178 Q9D3W4 ATP_bind_1

Related Sequences

 
mRNAGenPeptSwissProt
BC003341 AAH03341 Q9D3W4
AK016996 BAB30544 Q9D3W4
AK080720 BAC37993 Q9D3W4
AK087968 BAC40065 Q9D3W4
AK146783 BAE27429 Q9D3W4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Gpn3 NP_077178 R.norvegicus Gpn3 360810   NP_973720 98
H.sapiens GPN3 51184 Gene Info NP_001157845 95
D.melanogaster CG2656 40857   NP_649699 56
C.elegans Y75B8A.14 176649   NP_499587 55
A.gambiae AgaP_AGAP001152 1282014   XP_322008 54
A.thaliana AT4G12790 826891   NP_001031621 53
N.crassa NCU02658 3881572   XP_965431 46
S.pombe fet5 2543397   NP_594965 45
S.cerevisiae YLR243W 850944   NP_013344 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)