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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Socs2, suppressor of cytokine signaling 2
Sequence ID:NM_001168655
NM_001168656
NM_001168657
NM_007706
Entrez Gene ID:216233
Ensembl ID:ENSMUSG00000020027

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:10 C2|10 52.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:10: 95408352 - 95412199

 Exon Info From UCSC:
NM_001168655
NM_001168656
NM_001168657
NM_007706

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4989433Full LengthBC106153suppressor of cytokine signaling 2
1068260IncompleteBC027653suppressor of cytokine signaling 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031732  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001168655 NP_001162126    
NM_001168656 NP_001162127    
NM_001168657 NP_001162128    
NM_007706 NP_031732 Q548Q7
O35717
SH2
SOCS_box

Related Sequences

 
mRNAGenPeptSwissProt
U88327 AAB62402 Q548Q7
O35717
BC106153 AAI06154 Q548Q7
O35717
AK033206 BAC28196 Q8CCG3
AK137403 BAE23343 Q548Q7
O35717
AK160537 BAE35854 Q548Q7
O35717
AK162591 BAE36978 Q548Q7
O35717

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Socs2 NP_001162126 R.norvegicus Socs2 84607   NP_478115 98
H.sapiens SOCS2 8835 Gene Info NP_003868 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)