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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mef2d, myocyte enhancer factor 2D
Sequence ID:NM_133665
Entrez Gene ID:17261
Ensembl ID:ENSMUSG00000001419

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3 F1|3 43.0 cM

Chromosomal Position (from UCSC)

Chromosomal Position:3: 88170012 - 88172052

 Exon Info From UCSC:
NM_133665

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3497896Full LengthBC011070myocyte enhancer factor 2D
4920207IncompleteBC022753myocyte enhancer factor 2D
5360114IncompleteBC040217myocyte enhancer factor 2D

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598426  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_133665 NP_598426 Q921S6 SRF-TF

Related Sequences

 
mRNAGenPeptSwissProt
S68893 AAB29973 Q63943
S68895 AAB29974 Q63943
BC011070 AAH11070 Q921S6
AK141270 BAE24626 Q3URR2
AK155778 BAE33434 Q921S6

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mef2d NP_598426 R.norvegicus Mef2d 81518   NP_110487 100
H.sapiens MEF2D 4209 Gene Info NP_005911 97
C.elegans mef-2 172732   NP_492441 41
N.crassa NCU02558 3881839   XP_965689 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta