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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Mta1, metastasis associated 1
Sequence ID:NM_054081
Entrez Gene ID:116870
Ensembl ID:ENSMUSG00000021144

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:12|12 F

Chromosomal Position (from UCSC)

Chromosomal Position:12: 113098417 - 113136668

 Exon Info From UCSC:
NM_054081

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6515946Full LengthBC112910metastasis associated 1
4985808IncompleteBC024527metastasis associated 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_473422  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_054081 NP_473422   Myb_DNA-binding
GATA
BAH
ELM2

Related Sequences

 
mRNAGenPeptSwissProt
BC112910 AAI12911 Q2KHS8
AF288137 AAK83044 Q8K4B0
AF463504 AAM97588 Q8K4B0

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Mta1 NP_473422 R.norvegicus Mta1 64520   NP_072110 99
H.sapiens MTA1 9112 Gene Info NP_004680 97
A.gambiae AgaP_AGAP004341 1274488   XP_313620 60
D.melanogaster MTA1-like 40693   NP_730976 54

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta