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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Mm. Cpsf7, cleavage and polyadenylation specific factor 7
Sequence ID:NM_001164272
NM_172302
Entrez Gene ID:269061
Ensembl ID:ENSMUSG00000034820

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:19 A|19

Chromosomal Position (from UCSC)

Chromosomal Position:19: 10525265 - 10547402

 Exon Info From UCSC:
NM_001164272
NM_172302

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4506179Full LengthBC038812RIKEN cDNA 5730453I16 gene

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_758506  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001164272 NP_001157744    
NM_025333 NP_079609 Q8C6I2 TPR_div1
NM_172302 NP_758506 Q8BTV2 RRM_1

Related Sequences

 
mRNAGenPeptSwissProt
BC029630 AAH29630 Q8C6I2
BC038812 AAH38812 Q8BTV2
BC038924 AAH38924 Q8C6I2
BC048913 AAH48913 Q8C6I2
BC060090 AAH60090 Q8C6I2
BC085277 AAH85277 Q8C6I2
AK013454 BAB28863 Q8C6I2
AK053375 BAC35368 Q8BTV2
AK075594 BAC35843 Q8C6I2
AK088603 BAC40447 Q8BTV2
AK160175 BAE35674 Q8C6I2
AK160957 BAE36113 Q8C6I2
AK165330 BAE38138 Q8BTV2
AK167228 BAE39352 Q8C6I2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Cpsf7 NP_758506 R.norvegicus Cpsf7 365407   NP_001014267 100
H.sapiens CPSF7 79869 Gene Info NP_079087 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)