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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Mm. Setdb1, SET domain, bifurcated 1
Sequence ID:NM_001163641
NM_001163642
NM_018877
Entrez Gene ID:84505
Ensembl ID:ENSMUSG00000015697

Database Links

UniGeneEntrez GeneEnsembl GeneVegaSNPSNP: GeneViewSNP: VarViewAssemblies

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3|3 F2

Chromosomal Position (from UCSC)

Chromosomal Position:3: 95323524 - 95357156

 Exon Info From UCSC:
NM_001163641
NM_001163642
NM_018877

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6410215Full LengthBC079537SET domain, bifurcated 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061365  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163641 NP_001157113    
NM_001163642 NP_001157114    
NM_018877 NP_061365   SET
MBD
Pre-SET

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF091628 AAC43039 O88974 EC 2.1.1.43
BC007176 AAH07176 O88974 EC 2.1.1.43
BC079537 AAH79537 O88974 EC 2.1.1.43
AY091600 AAM13922 O88974 EC 2.1.1.43
AF546078 AAN52358 O88974 EC 2.1.1.43
AK088590 BAC40439 O88974 EC 2.1.1.43
AK122198 BAC65480 O88974 EC 2.1.1.43

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
M.musculus Setdb1 NP_001157114 R.norvegicus Setdb1 689883   XP_002729128 97
H.sapiens SETDB1 9869 Gene Info NP_001138887 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)